Supplementary material for the manuscript

Edit Kassai-Jáger, Csaba Ortutay, Gábor Tóth, Tibor Vellai and Zoltán Gáspári:
Distribution and Evolution of Short Tandem Repeats in Closely Related Bacterial Genomes

Table S1. Repeat istribution statistics for the investigated bacteria

Table S2. Repeat distribution similarity calculations for perfect-imperfect repeats in each bacterium and all-against-all comparison of bacterial repeats

Table S3. Statistics of amino acid repeats coded by the trinucleotide repeats identified

Table S4. Data of top 10 genes with highest repeat content

Table S5. Details of genes with high repeat content [xls]

Table S6. SSRs detected in genes introduced by horizontal gene transfer into the common ancestors of several of the Chlamydial strains investigated [xls]

Figure S1. Total length per megabase of imperfect trinucleotide repeats [pdf]

Figure S2 A) Graphical summary of the genomic distributions of the individual trinucleotide repeat classes in the E. coli strains [pdf]

Figure S2 B) Graphical summary of the genomic distributions of the individual trinucleotide repeat classes in the Chlamydia strains [pdf]

Figure S3 A) Alignment of the agc repeat region of the tolA gene in the 4 E. coli genomes [pdf]

Figure S3 B) Alignment of the agc repeat region of the ftsK gene in the 4 E. coli genomes [pdf]

Figure S4 Full sequence alignments of the tolA and ftsK genes in the 4 E. coli strains [pdf]